Basic Information
Gene ID 655517
Gene Name TcasGA2_TC002472
Full Name Putative uncharacterized protein
Organism Tribolium castaneum [7070]

Cross Reference
UniProt D6WHZ1 UniGene Tca.11958
PDB NULL OMIM NULL
KEGG tca:655517 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
XP_967163 Gene3D G3DSA:2.40.50.140 IPR012340 127 197 1.10e-25 Nucleic acid-binding, OB-fold
XP_967163 Gene3D G3DSA:2.40.50.140 IPR012340 219 274 1.50e-05 Nucleic acid-binding, OB-fold
XP_967163 Gene3D G3DSA:2.40.50.140 IPR012340 282 348 1.20e-25 Nucleic acid-binding, OB-fold
XP_967163 Gene3D G3DSA:2.40.50.140 IPR012340 445 520 2.50e-19 Nucleic acid-binding, OB-fold
XP_967163 Gene3D G3DSA:2.40.50.140 IPR012340 633 704 1.30e-21 Nucleic acid-binding, OB-fold
XP_967163 Gene3D G3DSA:2.40.50.140 IPR012340 793 856 1.40e-17 Nucleic acid-binding, OB-fold
XP_967163 Pfam PF00313 IPR002059 129 192 5.40e-12 Cold-shock protein, DNA-binding
XP_967163 Pfam PF00313 IPR002059 283 342 8.60e-15 Cold-shock protein, DNA-binding
XP_967163 Pfam PF00313 IPR002059 448 498 2.70e-06 Cold-shock protein, DNA-binding
XP_967163 Pfam PF00313 IPR002059 635 697 2.60e-12 Cold-shock protein, DNA-binding
XP_967163 Pfam PF00313 IPR002059 792 853 2.90e-08 Cold-shock protein, DNA-binding
XP_967163 Pfam PF12901 IPR024642 867 896 5.10e-09 SUZ-C domain
XP_967163 ProSitePatterns PS00352 IPR019844 139 158 - Cold-shock conserved site
XP_967163 ProSitePatterns PS00352 IPR019844 645 664 - Cold-shock conserved site
XP_967163 SMART SM00357 IPR011129 129 192 7.90e-13 Cold shock protein
XP_967163 SMART SM00357 IPR011129 283 343 1.40e-17 Cold shock protein
XP_967163 SMART SM00357 IPR011129 448 509 2.10e-05 Cold shock protein
XP_967163 SMART SM00357 IPR011129 635 699 1.90e-11 Cold shock protein
XP_967163 SMART SM00357 IPR011129 791 854 2.20e-09 Cold shock protein
XP_967163 SUPERFAMILY SSF50249 IPR012340 123 195 0.00e-00 Nucleic acid-binding, OB-fold
XP_967163 SUPERFAMILY SSF50249 IPR012340 273 348 0.00e-00 Nucleic acid-binding, OB-fold
XP_967163 SUPERFAMILY SSF50249 IPR012340 435 519 0.00e-00 Nucleic acid-binding, OB-fold
XP_967163 SUPERFAMILY SSF50249 IPR012340 627 703 0.00e-00 Nucleic acid-binding, OB-fold
XP_967163 SUPERFAMILY SSF50249 IPR012340 782 855 0.00e-00 Nucleic acid-binding, OB-fold

Pfam Annotation
Protein Pfam ID E.value Name Description
XP_967163 PF00313 0 CSD 'Cold-shock' DNA-binding domain
XP_967163 PF12901 1.7e-09 SUZ-C SUZ-C motif
XP_967163 PF14444 7.9e-08 S1-like S1-like
XP_967163 PF01345 1.8e-05 DUF11 Domain of unknown function DUF11
XP_967163 PF11604 0.00019 CusF_Ec Copper binding periplasmic protein CusF

Gene Ontology Annotation
Protein Entry Name Space Description
XP_967163 GO:0006355 biological_process regulation of transcription, DNA-templated
XP_967163 GO:0070966 biological_process nuclear-transcribed mRNA catabolic process, no-go decay
XP_967163 GO:0005737 cellular_component cytoplasm
XP_967163 GO:0070937 cellular_component CRD-mediated mRNA stability complex
XP_967163 GO:0003677 molecular_function DNA binding
XP_967163 GO:0003723 molecular_function RNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
13616 Monodelphis domestica 100009761 400682 Amphimedon queenslandica 100631963
59463 Myotis lucifugus 102429010 10090 Mus musculus 229663
7425 Nasonia vitripennis 100123206 61853 Nomascus leucogenys 100590871
8128 Oreochromis niloticus 100701469 34638 Metaseiulus occidentalis 100908518
9597 Pan paniscus 100968628 9555 Papio anubis 101024024
39432 Saimiri boliviensis 101034862 9595 Gorilla gorilla 101146917
9606 Homo sapiens 7812 9646 Ailuropoda melanoleuca ENSAMEG00000017129
7719 Ciona intestinalis ENSCING00000014465 9483 Callithrix jacchus ENSCJAG00000012565
9361 Dasypus novemcinctus ENSDNOG00000010287 10020 Dipodomys ordii ENSDORG00000011609
9371 Echinops telfairi ENSETEG00000006280 9685 Felis catus ENSFCAG00000029266
69293 Gasterosteus aculeatus ENSGACG00000004544 9031 Gallus gallus ENSGALG00000002139
8049 Gadus morhua ENSGMOG00000012731 9315 Macropus eugenii ENSMEUG00000002677
9103 Meleagris gallopavo ENSMGAG00000016381 9258 Ornithorhynchus anatinus ENSOANG00000003346
9813 Procavia capensis ENSPCAG00000014368 9601 Pongo abelii ENSPPYG00000000996
132908 Pteropus vampyrus ENSPVAG00000008225 9823 Sus scrofa ENSSSCG00000006752
59729 Taeniopygia guttata ENSTGUG00000000972 31033 Takifugu rubripes ENSTRUG00000007996
9739 Tursiops truncatus ENSTTRG00000015583 30538 Vicugna pacos ENSVPAG00000000749
8083 Xiphophorus maculatus ENSXMAG00000009080 9615 Canis familiaris ENSCAFG00000009618
9358 Choloepus hoffmanni ENSCHOG00000000918 51511 Ciona savignyi ENSCSAVG00000008100
9796 Equus caballus ENSECAG00000020885 9365 Erinaceus europaeus ENSEEUG00000006286
9785 Loxodonta africana ENSLAFG00000007150 9669 Mustela putorius furo ENSMPUG00000005753
9978 Ochotona princeps ENSOPRG00000005002 8090 Oryzias latipes ENSORLG00000000707
13735 Pelodiscus sinensis ENSPSIG00000003823 42254 Sorex araneus ENSSARG00000000738
99883 Tetraodon nigroviridis ENSTNIG00000010878 9478 Tarsius syrichta ENSTSYG00000003747