Basic Information
Gene ID ENSECAG00000020885
Gene Name CSDE1
Full Name Uncharacterized protein
Organism Equus caballus [9796]

Cross Reference
UniProt F6QY89 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSECAP00000018826 Gene3D G3DSA:2.40.50.140 IPR012340 194 262 1.20e-26 Nucleic acid-binding, OB-fold
ENSECAP00000018826 Gene3D G3DSA:2.40.50.140 IPR012340 357 427 1.80e-24 Nucleic acid-binding, OB-fold
ENSECAP00000018826 Gene3D G3DSA:2.40.50.140 IPR012340 466 522 1.00e-06 Nucleic acid-binding, OB-fold
ENSECAP00000018826 Gene3D G3DSA:2.40.50.140 IPR012340 526 590 3.60e-21 Nucleic acid-binding, OB-fold
ENSECAP00000018826 Gene3D G3DSA:2.40.50.140 IPR012340 65 133 1.30e-25 Nucleic acid-binding, OB-fold
ENSECAP00000018826 Gene3D G3DSA:2.40.50.140 IPR012340 685 750 8.50e-21 Nucleic acid-binding, OB-fold
ENSECAP00000018826 Pfam PF00313 IPR002059 195 256 6.90e-17 Cold-shock protein, DNA-binding
ENSECAP00000018826 Pfam PF00313 IPR002059 360 420 9.20e-09 Cold-shock protein, DNA-binding
ENSECAP00000018826 Pfam PF00313 IPR002059 529 589 9.60e-15 Cold-shock protein, DNA-binding
ENSECAP00000018826 Pfam PF00313 IPR002059 67 129 1.80e-14 Cold-shock protein, DNA-binding
ENSECAP00000018826 Pfam PF00313 IPR002059 683 745 4.10e-15 Cold-shock protein, DNA-binding
ENSECAP00000018826 Pfam PF12901 IPR024642 764 797 7.70e-13 SUZ-C domain
ENSECAP00000018826 ProSitePatterns PS00352 IPR019844 206 225 - Cold-shock conserved site
ENSECAP00000018826 ProSitePatterns PS00352 IPR019844 369 388 - Cold-shock conserved site
ENSECAP00000018826 ProSitePatterns PS00352 IPR019844 538 557 - Cold-shock conserved site
ENSECAP00000018826 ProSitePatterns PS00352 IPR019844 77 96 - Cold-shock conserved site
ENSECAP00000018826 SMART SM00357 IPR011129 196 257 7.20e-22 Cold shock protein
ENSECAP00000018826 SMART SM00357 IPR011129 359 422 3.00e-18 Cold shock protein
ENSECAP00000018826 SMART SM00357 IPR011129 528 590 2.40e-17 Cold shock protein
ENSECAP00000018826 SMART SM00357 IPR011129 67 130 9.70e-19 Cold shock protein
ENSECAP00000018826 SMART SM00357 IPR011129 683 746 8.90e-19 Cold shock protein
ENSECAP00000018826 SUPERFAMILY SSF50249 IPR012340 191 262 0.00e-00 Nucleic acid-binding, OB-fold
ENSECAP00000018826 SUPERFAMILY SSF50249 IPR012340 345 426 0.00e-00 Nucleic acid-binding, OB-fold
ENSECAP00000018826 SUPERFAMILY SSF50249 IPR012340 522 590 0.00e-00 Nucleic acid-binding, OB-fold
ENSECAP00000018826 SUPERFAMILY SSF50249 IPR012340 57 133 0.00e-00 Nucleic acid-binding, OB-fold
ENSECAP00000018826 SUPERFAMILY SSF50249 IPR012340 669 749 0.00e-00 Nucleic acid-binding, OB-fold

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSECAP00000018826 PF00313 0 CSD 'Cold-shock' DNA-binding domain
ENSECAP00000018826 PF14444 1.7e-13 S1-like S1-like
ENSECAP00000018826 PF12901 3.5e-13 SUZ-C SUZ-C motif
ENSECAP00000018826 PF11604 2.4e-06 CusF_Ec Copper binding periplasmic protein CusF

Gene Ontology Annotation
Protein Entry Name Space Description
ENSECAP00000018826 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSECAP00000018826 GO:0070966 biological_process nuclear-transcribed mRNA catabolic process, no-go decay
ENSECAP00000018826 GO:0005737 cellular_component cytoplasm
ENSECAP00000018826 GO:0070937 cellular_component CRD-mediated mRNA stability complex
ENSECAP00000018826 GO:0003677 molecular_function DNA binding
ENSECAP00000018826 GO:0003723 molecular_function RNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
13616 Monodelphis domestica 100009761 400682 Amphimedon queenslandica 100631963
10090 Mus musculus 229663 9615 Canis familiaris ENSCAFG00000009618
9358 Choloepus hoffmanni ENSCHOG00000000918 7425 Nasonia vitripennis 100123206
61853 Nomascus leucogenys 100590871 8128 Oreochromis niloticus 100701469
34638 Metaseiulus occidentalis 100908518 9597 Pan paniscus 100968628
9555 Papio anubis 101024024 39432 Saimiri boliviensis 101034862
9595 Gorilla gorilla 101146917 59463 Myotis lucifugus 102429010
7070 Tribolium castaneum 655517 9606 Homo sapiens 7812
9646 Ailuropoda melanoleuca ENSAMEG00000017129 7719 Ciona intestinalis ENSCING00000014465
9483 Callithrix jacchus ENSCJAG00000012565 51511 Ciona savignyi ENSCSAVG00000008100
9361 Dasypus novemcinctus ENSDNOG00000010287 10020 Dipodomys ordii ENSDORG00000011609
9371 Echinops telfairi ENSETEG00000006280 9685 Felis catus ENSFCAG00000029266
69293 Gasterosteus aculeatus ENSGACG00000004544 9031 Gallus gallus ENSGALG00000002139
8049 Gadus morhua ENSGMOG00000012731 9315 Macropus eugenii ENSMEUG00000002677
9103 Meleagris gallopavo ENSMGAG00000016381 9258 Ornithorhynchus anatinus ENSOANG00000003346
9813 Procavia capensis ENSPCAG00000014368 9601 Pongo abelii ENSPPYG00000000996
132908 Pteropus vampyrus ENSPVAG00000008225 42254 Sorex araneus ENSSARG00000000738
9823 Sus scrofa ENSSSCG00000006752 59729 Taeniopygia guttata ENSTGUG00000000972
31033 Takifugu rubripes ENSTRUG00000007996 9478 Tarsius syrichta ENSTSYG00000003747
9739 Tursiops truncatus ENSTTRG00000015583 30538 Vicugna pacos ENSVPAG00000000749
8083 Xiphophorus maculatus ENSXMAG00000009080 9365 Erinaceus europaeus ENSEEUG00000006286
9785 Loxodonta africana ENSLAFG00000007150 9669 Mustela putorius furo ENSMPUG00000005753
9978 Ochotona princeps ENSOPRG00000005002 8090 Oryzias latipes ENSORLG00000000707
13735 Pelodiscus sinensis ENSPSIG00000003823 99883 Tetraodon nigroviridis ENSTNIG00000010878