Hierarchy For All Packages

Package Hierarchies:

charite.andrean, charite.christo, charite.christo.blast, charite.christo.hotswap, charite.christo.libs, charite.christo.libs.bzip2, charite.christo.protein, charite.christo.strap, charite.christo.strap.extensions, charite.christo.strap.science, charite.christo.test

Class Hierarchy

• java.lang.Object
  • charite.christo.strap.AbstractAlignAndCompare (implements charite.christo.Disposable, charite.christo.HasControlPanel, charite.christo.HasModiCount, charite.christo.HasSharedControlPanel, charite.christo.strap.ProteinProteinValue, charite.christo.protein.StrapListener)
    • charite.christo.strap.extensions.AlignmentScore (implements charite.christo.strap.ProteinProteinSimilarity)
    • charite.christo.strap.extensions.IndividualSequenceDisSimilarity (implements charite.christo.strap.ProteinProteinDistance)
    • charite.christo.strap.extensions.RmsdValue (implements charite.christo.IsEnabled, charite.christo.strap.ProteinProteinDistance)
    • charite.christo.strap.extensions.SequenceDisSimilarityAsAligned (implements charite.christo.strap.ProteinProteinDistance)
  • charite.christo.strap.AbstractAligner (implements charite.christo.CanBeStopped, charite.christo.Disposable, charite.christo.HasControlPanel, charite.christo.HasNativeExec, charite.christo.HasPropertyMap, charite.christo.IsEnabled)
    • charite.christo.strap.extensions.Aligner3D_Mapsci (implements charite.christo.HasControlPanel, charite.christo.protein.SequenceAligner3D)
    • charite.christo.strap.extensions.Aligner3D_Matt (implements charite.christo.protein.SequenceAligner3D)
    • charite.christo.strap.extensions.Aligner3D_Mustang (implements charite.christo.protein.SequenceAligner3D)
    • charite.christo.strap.extensions.Aligner3D_Smolign (implements charite.christo.protein.SequenceAligner3D)
    • charite.christo.strap.extensions.MultipleAligner_SPEM (implements charite.christo.protein.SequenceAligner)
    • charite.christo.strap.extensions.MultipleAlignerAlign_m (implements charite.christo.HasPrgParas, charite.christo.protein.SequenceAligner)
    • charite.christo.strap.extensions.MultipleAlignerAmap (implements charite.christo.HasPrgParas, charite.christo.protein.SequenceAlignerSorting)
    • charite.christo.strap.extensions.MultipleAlignerClustalW (implements charite.christo.HasPrgParas, charite.christo.HasScore, charite.christo.protein.SequenceAlignerSorting, charite.christo.protein.SequenceAlignerTakesProfile)
    • charite.christo.strap.extensions.MultipleAlignerDialign (implements charite.christo.HasPrgParas, charite.christo.protein.SequenceAligner)
    • charite.christo.strap.extensions.MultipleAlignerDialignT (implements charite.christo.HasPrgParas, charite.christo.protein.SequenceAligner)
    • charite.christo.strap.extensions.MultipleAlignerKalign (implements charite.christo.HasPrgParas, charite.christo.protein.SequenceAlignerSorting)
    • charite.christo.strap.extensions.MultipleAlignerMafft (implements charite.christo.HasPrgParas, charite.christo.protein.SequenceAlignerSorting)
    • charite.christo.strap.extensions.MultipleAlignerMuscle (implements charite.christo.HasPrgParas, charite.christo.protein.SequenceAlignerSorting)
    • charite.christo.strap.extensions.MultipleAlignerProbcons2 (implements charite.christo.HasPrgParas, charite.christo.protein.SequenceAlignerSorting)
    • charite.christo.strap.extensions.MultipleAlignerT_Coffee (implements charite.christo.HasPrgParas, charite.christo.HasScore, charite.christo.protein.NeedsProteins, charite.christo.protein.SequenceAlignerSorting, charite.christo.protein.SequenceAlignerTakesProfile)
    • charite.christo.strap.extensions.PairAlignerJAligner (implements charite.christo.HasScore, charite.christo.protein.SequenceAligner)
    • charite.christo.strap.extensions.PairAlignerNeoBio (implements charite.christo.HasScore, charite.christo.protein.SequenceAligner)
    • charite.christo.strap.extensions.Superimpose_CE (implements charite.christo.HasScore, charite.christo.protein.SequenceAligner3D, charite.christo.protein.Superimpose3D)
    • charite.christo.strap.extensions.Superimpose_GangstaPlus (implements charite.christo.HasScore, charite.christo.protein.Superimpose3D)
    • charite.christo.strap.extensions.Superimpose_LajollaProtein (implements charite.christo.HasScore, charite.christo.protein.Superimpose3D)
    • charite.christo.strap.extensions.Superimpose_native_CE (implements charite.christo.HasControlPanel, charite.christo.HasScore, charite.christo.protein.SequenceAligner3D, charite.christo.protein.Superimpose3D)
    • charite.christo.strap.extensions.Superimpose_TM_align (implements charite.christo.HasScore, charite.christo.protein.SequenceAligner3D, charite.christo.protein.Superimpose3D)
  • charite.christo.strap.AbstractAlignmentProject.Alignment (implements java.awt.event.ActionListener)
  • charite.christo.blast.AbstractBlaster (implements java.awt.event.ActionListener, charite.christo.Disposable, charite.christo.HasControlPanel, charite.christo.blast.SequenceBlaster)
    • charite.christo.blast.Blaster_local_Wu
      • charite.christo.blast.Blaster_local_NCBI
        • charite.christo.blast.Blaster_local_NCBI_gapped_PSI
    • charite.christo.blast.Blaster_SOAP_ebi (implements charite.christo.NeedsInternet)
  • javax.swing.border.AbstractBorder (implements javax.swing.border.Border, java.io.Serializable)
    • charite.christo.ChRenderer (implements javax.swing.ListCellRenderer, charite.christo.PaintHook, charite.christo.ProcessEv, javax.swing.table.TableCellEditor, javax.swing.table.TableCellRenderer, javax.swing.tree.TreeCellRenderer)
      • charite.christo.protein.DAS (implements java.util.Comparator<T>)
      • charite.christo.strap.StrapDAS (implements charite.christo.ChRunnable, charite.christo.ProcessEv)
  • charite.christo.AbstractInteractiveFileProcessor (implements java.awt.event.ActionListener)
    • charite.christo.NCBI_separateEntries
    • charite.christo.PDB_separateChains
  • javax.swing.AbstractListModel (implements javax.swing.ListModel, java.io.Serializable)
    • javax.swing.DefaultComboBoxModel (implements javax.swing.MutableComboBoxModel, java.io.Serializable)
      • charite.christo.strap.ComboKeys
    • charite.christo.strap.V3dListModel
  • charite.christo.protein.AbstractPredictionFromAminoacidSequence (implements charite.christo.Disposable, charite.christo.protein.PredictionFromAminoacidSequence)
    • charite.christo.strap.extensions.SecondaryStructure_NNPREDICT (implements charite.christo.HasControlPanel, charite.christo.NeedsInternet, charite.christo.protein.SecondaryStructure_Predictor)
    • charite.christo.strap.extensions.SecondaryStructure_Sopma (implements charite.christo.HasControlPanel, charite.christo.HasSharedControlPanel, charite.christo.NeedsInternet, charite.christo.protein.SecondaryStructure_Predictor)
    • charite.christo.strap.extensions.TransmembraneHelix_DAS (implements charite.christo.HasControlPanel, charite.christo.HasSharedControlPanel, charite.christo.NeedsInternet, charite.christo.protein.TransmembraneHelix_Predictor)
    • charite.christo.strap.extensions.TransmembraneHelix_HMMTOP (implements charite.christo.Disposable, charite.christo.HasControlPanel, charite.christo.NeedsInternet, charite.christo.protein.TransmembraneHelix_Predictor)
    • charite.christo.strap.extensions.TransmembraneHelix_MEMSAT (implements charite.christo.HasControlPanel, charite.christo.NeedsInternet, charite.christo.protein.TransmembraneHelix_Predictor)
    • charite.christo.strap.extensions.TransmembraneHelix_ORIENTM (implements charite.christo.HasControlPanel, charite.christo.NeedsInternet, charite.christo.protein.TransmembraneHelix_Predictor)
    • charite.christo.strap.extensions.TransmembraneHelix_Phobius (implements charite.christo.HasControlPanel, charite.christo.NeedsInternet, charite.christo.protein.TransmembraneHelix_Predictor)
    • charite.christo.strap.extensions.TransmembraneHelix_PRED_TMR (implements charite.christo.HasControlPanel, charite.christo.HasSharedControlPanel, charite.christo.NeedsInternet, charite.christo.protein.TransmembraneHelix_Predictor)
    • charite.christo.strap.extensions.TransmembraneHelix_SOSUI (implements charite.christo.HasControlPanel, charite.christo.NeedsInternet, charite.christo.protein.TransmembraneHelix_Predictor)
    • charite.christo.strap.extensions.TransmembraneHelix_SPLIT3 (implements charite.christo.HasControlPanel, charite.christo.HasSharedControlPanel, charite.christo.NeedsInternet, charite.christo.protein.TransmembraneHelix_Predictor)
    • charite.christo.strap.extensions.TransmembraneHelix_SPLIT4 (implements charite.christo.Disposable, charite.christo.HasControlPanel, charite.christo.NeedsInternet, charite.christo.protein.TransmembraneHelix_Predictor)
    • charite.christo.strap.extensions.TransmembraneHelix_THUMBUP (implements charite.christo.HasControlPanel, charite.christo.NeedsInternet, charite.christo.protein.TransmembraneHelix_Predictor)
    • charite.christo.strap.extensions.TransmembraneHelix_TMAP (implements charite.christo.HasControlPanel, charite.christo.NeedsInternet, charite.christo.protein.TransmembraneHelix_Predictor)
    • charite.christo.strap.extensions.TransmembraneHelix_TMHMM2 (implements charite.christo.HasControlPanel, charite.christo.NeedsInternet, charite.christo.protein.TransmembraneHelix_Predictor)
    • charite.christo.strap.extensions.TransmembraneHelix_TMPRED (implements charite.christo.HasControlPanel, charite.christo.HasSharedControlPanel, charite.christo.NeedsInternet, charite.christo.protein.TransmembraneHelix_Predictor)
    • charite.christo.strap.extensions.TransmembraneHelix_WaveTM (implements charite.christo.Disposable, charite.christo.HasControlPanel, charite.christo.NeedsInternet, charite.christo.protein.TransmembraneHelix_Predictor)
  • charite.christo.AbstractProxy (implements charite.christo.HasPropertyMap)
    • charite.christo.strap.AbstractAlignerProxy
      • charite.christo.strap.extensions.PairAlignerJAlignerPROXY (implements charite.christo.HasScore, charite.christo.HasSharedControlPanel, charite.christo.protein.SequenceAligner)
      • charite.christo.strap.extensions.PairAlignerNeoBioPROXY (implements charite.christo.HasScore, charite.christo.protein.SequenceAligner)
      • charite.christo.strap.extensions.Superimpose_CEPROXY (implements charite.christo.HasScore, charite.christo.protein.SequenceAligner3D, charite.christo.protein.Superimpose3D)
      • charite.christo.strap.extensions.Superimpose_GoedePROXY (implements charite.christo.protein.Superimpose3D)
      • charite.christo.strap.extensions.Superimpose_LajollaProteinPROXY (implements charite.christo.protein.Superimpose3D)
        • charite.christo.strap.extensions.Superimpose_LajollaRNA
    • charite.christo.protein.AbstractProteinViewerProxy (implements charite.christo.ChRunnable, charite.christo.protein.ProteinViewer)
      • charite.christo.protein.ChAstexPROXY (implements charite.christo.HasControlPanel)
      • charite.christo.protein.ChJmolPROXY (implements charite.christo.protein.ProteinViewer)
    • charite.christo.AnonymousFTPPROXY
    • charite.christo.ChCompilerJavacPROXY
    • charite.christo.ChHttpClientPROXY
    • charite.christo.ChJOrthoPROXY (implements charite.christo.ChRunnable)
    • charite.christo.ChPdfUtilsPROXY
    • charite.christo.ChTarPROXY
    • charite.christo.strap.science.FlavinePROXY (implements charite.christo.HasControlPanel, charite.christo.HasPanel)
  • charite.christo.strap.extensions.AbstractSubcellularLocation (implements charite.christo.protein.PredictSubcellularLocation)
    • charite.christo.strap.extensions.SubcellularLocationHum_mPloc
    • charite.christo.strap.extensions.SubcellularLocationPLOC (implements charite.christo.HasPrgParas)
  • javax.swing.table.AbstractTableModel (implements java.io.Serializable, javax.swing.table.TableModel)
    • charite.christo.ChTableModel
    • javax.swing.table.DefaultTableModel (implements java.io.Serializable)
      • charite.christo.strap.DialogAlignOneToAllResult (implements charite.christo.Disposable, charite.christo.ProcessEv, java.lang.Runnable)
      • charite.christo.strap.EditDnaTable (implements java.awt.event.ActionListener, charite.christo.protein.StrapListener)
      • charite.christo.strap.ResidueAnnotationView (implements charite.christo.ChRunnable, charite.christo.Disposable, charite.christo.HasPanel, javax.swing.ListCellRenderer, charite.christo.ProcessEv, charite.christo.protein.StrapListener, javax.swing.table.TableCellEditor, javax.swing.table.TableCellRenderer)
      • charite.christo.strap.SequenceFeatures (implements charite.christo.ChRunnable, java.util.Comparator<T>, charite.christo.ProcessEv, charite.christo.TooltipProvider)
  • charite.christo.protein.AbstractValueOfResidue (implements charite.christo.Colored, charite.christo.protein.ValueOfResidue)
    • charite.christo.strap.extensions.Hydrophobicity (implements java.awt.event.ActionListener, charite.christo.HasSharedControlPanel)
    • charite.christo.strap.extensions.ResidueHydrophobicity_TOPPRED (implements charite.christo.HasNativeExec)
  • charite.christo.protein.AbstractVisibleIn123 (implements charite.christo.HasImage, charite.christo.HasPropertyMap, charite.christo.HasWeakRef, charite.christo.protein.VisibleIn123)
    • charite.christo.protein.BasicResidueSelection (implements charite.christo.HasName, charite.christo.HasRenderer, charite.christo.protein.ResidueSelection)
      • charite.christo.strap.Distance3DToCursor (implements javax.swing.event.ChangeListener, charite.christo.HasImage, charite.christo.HasSharedControlPanel, charite.christo.IsEnabled, charite.christo.protein.StrapListener)
      • charite.christo.strap.extensions.Distance3DToHetero (implements java.awt.event.ActionListener, charite.christo.HasSharedControlPanel, charite.christo.IsEnabled, charite.christo.protein.StrapListener)
  • charite.christo.strap.AcceptAlignment2
  • charite.christo.strap.Aligner3D (implements java.awt.event.ActionListener, charite.christo.CanBeStopped, charite.christo.HasControlPanel, charite.christo.HasSharedControlPanel, charite.christo.protein.NeedsProteins, charite.christo.protein.SequenceAlignerSorting)
  • charite.christo.strap.extensions.AlignmentEntropy (implements java.awt.event.ActionListener, charite.christo.HasModiCount, charite.christo.HasSharedControlPanel, charite.christo.protein.StrapListener, charite.christo.strap.ValueOfAlignPosition)
  • charite.christo.strap.extensions.AlignmentWriterHSSP (implements charite.christo.strap.AlignmentWriter)
  • charite.christo.AnonymousFTP (implements charite.christo.ChRunnable)
  • charite.christo.AnsiEscape
  • com.apple.eawt.ApplicationAdapter (implements com.apple.eawt.ApplicationListener)
    • charite.christo.strap.StrapMacApplicationListener
  • charite.christo.Archive
  • charite.andrean.Area
  • charite.christo.BA (implements java.lang.CharSequence, charite.christo.ChRunnable, java.lang.Comparable<T>, charite.christo.HasModiCount, charite.christo.HasPropertyMap)
  • charite.christo.protein.Backtranslate
  • charite.christo.protein.Backtranslate.Codonusage
  • charite.christo.libs.Base64
  • charite.christo.BasicExecutable (implements charite.christo.CanBeStopped, charite.christo.ChRunnable, charite.christo.Disposable, charite.christo.HasControlPanel)
    • charite.christo.NativeTools
    • charite.christo.strap.extensions.SecondaryStructure_Jnet (implements charite.christo.protein.SecondaryStructure_Predictor)
    • charite.christo.strap.extensions.Toppred (implements charite.christo.HasPrgParas)
  • charite.christo.protein.Bl2seq (implements charite.christo.HasNativeExec)
  • charite.christo.protein.Bl2seq.Hit
  • charite.christo.blast.BlastAlignment
  • charite.christo.blast.BlastDatabase
  • charite.christo.blast.BlastHit
  • charite.christo.blast.BlastHitIntersection
  • charite.christo.blast.BlastParser
  • charite.christo.blast.BlastResult
  • charite.christo.protein.Blosum
  • charite.christo.libs.bzip2.BZip2Constants
  • charite.christo.CacheResult (implements charite.christo.ChRunnable)
  • charite.christo.protein.ChAlignUtils
  • charite.christo.ChAppleScript
  • charite.christo.protein.ChAstex (implements charite.christo.ChRunnable, astex.MoleculeRendererListener, charite.christo.ProcessEv, charite.christo.protein.ProteinViewer)
  • charite.christo.ChCatdoc
  • charite.christo.ChCodeViewer
  • charite.christo.ChComparator (implements java.util.Comparator<T>)
  • charite.christo.ChCompilerJavac (implements charite.christo.ChRunnable)
  • charite.christo.ChConstants
  • charite.christo.ChEnv
  • charite.christo.ChExec (implements java.awt.event.ActionListener, charite.christo.ChRunnable, charite.christo.HasControlPanel, java.lang.Runnable)
  • charite.christo.ChExecSecurity
  • charite.christo.ChHttpClient (implements charite.christo.ChRunnable)
  • charite.christo.ChInStream
  • charite.christo.ChJavadoc (implements java.awt.event.ActionListener)
  • charite.christo.protein.ChJmol (implements charite.christo.ChRunnable, org.jmol.api.JmolCallbackListener, charite.christo.PaintHook, charite.christo.protein.ProteinViewer)
  • charite.christo.ChJnlp
  • charite.christo.ChJOrtho (implements charite.christo.ChRunnable, com.inet.jortho.CustomDictionaryProvider)
  • charite.christo.ChLogger (implements java.awt.event.ActionListener, charite.christo.ChRunnable, charite.christo.HasPanel)
  • charite.christo.ChMap<K,V> (implements charite.christo.ChRunnable, charite.christo.HasModiCount, java.util.Map<K,V>)
  • charite.christo.ChMsg (implements charite.christo.ChRunnable)
  • charite.christo.ChMsgDia (implements java.awt.event.ActionListener, java.lang.Runnable)
  • charite.christo.ChPdfUtils (implements charite.christo.ChRunnable)
  • charite.christo.ChPubmed (implements java.awt.event.ActionListener, charite.christo.ChRunnable)
  • charite.christo.ChRegex
  • charite.christo.ChScriptPanel (implements java.awt.event.ActionListener, javax.swing.event.CaretListener)
  • charite.christo.ChSet<E> (implements charite.christo.HasModiCount, java.util.Set<E>)
  • charite.christo.protein.ChSoapEBI
  • charite.christo.ChSprite (implements java.lang.Runnable)
  • charite.christo.ChStdout (implements java.awt.event.ActionListener, charite.christo.ChRunnable)
  • charite.christo.ChTar (implements charite.christo.ChRunnable)
  • charite.christo.ChTextComponents (implements charite.christo.ChRunnable, javax.swing.event.DocumentListener, charite.christo.HasModiCount, charite.christo.PaintHook, charite.christo.ProcessEv, javax.swing.event.UndoableEditListener)
  • charite.christo.ChTextReplacement
  • charite.christo.ChThread (implements java.lang.Runnable)
  • charite.christo.ChTokenizer
  • charite.christo.ChTransferable (implements java.awt.datatransfer.Transferable)
  • charite.christo.ChTreeModel (implements javax.swing.tree.TreeModel)
  • charite.christo.ChUtils (implements charite.christo.ChRunnable, charite.christo.ProcessEv)
  • charite.christo.ChUtils.EvLi (implements javax.swing.event.ListSelectionListener, javax.swing.event.PopupMenuListener, javax.swing.event.TreeSelectionListener)
  • charite.christo.ChZip
  • java.lang.ClassLoader
    • java.security.SecureClassLoader
      • java.net.URLClassLoader
        • charite.christo.ChClassLoader1 (implements charite.christo.HasWeakRef)
  • charite.christo.strap.extensions.CoiledCoil_PredictorRobinson (implements charite.christo.protein.CoiledCoil_Predictor)
  • java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
    • java.awt.Container
      • javax.swing.JComponent (implements java.io.Serializable)
        • javax.swing.AbstractButton (implements java.awt.ItemSelectable, javax.swing.SwingConstants)
          • javax.swing.JButton (implements javax.accessibility.Accessible)
            • charite.christo.ChButton (implements charite.christo.ChRunnable, charite.christo.HasModiCount, charite.christo.HasRenderer, charite.christo.ProcessEv)
              • charite.christo.ButColor
              • charite.christo.FreeMemoryBar (implements java.lang.Runnable)
              • charite.christo.protein.ProteinLabel
          • javax.swing.JMenuItem (implements javax.accessibility.Accessible, javax.swing.MenuElement)
            • charite.christo.ChButton.MItem
            • javax.swing.JMenu (implements javax.accessibility.Accessible, javax.swing.MenuElement)
              • charite.christo.ChJMenu (implements javax.swing.event.MenuListener, charite.christo.ProcessEv)
          • javax.swing.JToggleButton (implements javax.accessibility.Accessible)
            • javax.swing.JCheckBox (implements javax.accessibility.Accessible)
              • charite.christo.ChJCheckBox
        • javax.swing.Box (implements javax.accessibility.Accessible)
          • charite.christo.strap.TexshadeGraph (implements java.awt.event.ActionListener, charite.christo.IsEnabled)
        • charite.christo.strap.DialogResidueAnnotationList (implements charite.christo.ProcessEv)
        • javax.swing.JComboBox (implements javax.accessibility.Accessible, java.awt.event.ActionListener, java.awt.ItemSelectable, javax.swing.event.ListDataListener)
          • charite.christo.ChCombo (implements charite.christo.HasModiCount, charite.christo.IsEnabled, charite.christo.ProcessEv, java.lang.Runnable)
            • charite.christo.strap.ProteinCombo (implements charite.christo.protein.HasProtein)
            • charite.christo.protein.ShadingAA
        • javax.swing.JFileChooser (implements javax.accessibility.Accessible)
          • charite.christo.ChFileChooser (implements charite.christo.ChRunnable, charite.christo.Disposable, charite.christo.ProcessEv, java.beans.PropertyChangeListener, java.lang.Runnable)
        • javax.swing.JList (implements javax.accessibility.Accessible, javax.swing.Scrollable)
          • charite.christo.ChJList (implements charite.christo.HasModiCount, charite.christo.IsEnabled, charite.christo.ProcessEv)
            • charite.christo.strap.ProteinList
        • javax.swing.JMenuBar (implements javax.accessibility.Accessible, javax.swing.MenuElement)
          • charite.christo.ChJMenuBar
        • javax.swing.JPanel (implements javax.accessibility.Accessible)
          • charite.christo.strap.AddAnnotation (implements java.awt.event.ActionListener, javax.swing.ListCellRenderer)
          • charite.christo.ChPanel (implements javax.swing.Scrollable)
            • charite.christo.strap.AbstractDialogJPanel (implements charite.christo.Disposable)
              • charite.christo.strap.AbstractAlignmentProject (implements java.awt.event.ActionListener)
                • charite.christo.strap.science.Flavine (implements java.awt.event.ActionListener, org.jfree.chart.ChartMouseListener, charite.christo.HasControlPanel)
                • charite.christo.strap.science.Prione
                • charite.christo.strap.science.Proteasome
              • charite.christo.strap.Dialog3DViewer (implements java.awt.event.ActionListener)
              • charite.christo.strap.DialogBarChart (implements java.awt.event.ActionListener, charite.christo.protein.StrapListener)
              • charite.christo.strap.DialogCopyAnnotations (implements java.lang.Runnable)
              • charite.christo.strap.DialogDotPlot (implements charite.christo.Disposable, charite.christo.HasControlPanel, charite.christo.PaintHook, charite.christo.ProcessEv, charite.christo.protein.StrapListener)
              • charite.christo.strap.DialogExportProteins (implements java.awt.event.ActionListener)
              • charite.christo.strap.DialogHighlightPattern (implements java.awt.event.ActionListener, charite.christo.Disposable, java.lang.Runnable, charite.christo.protein.StrapListener, javax.swing.table.TableModel)
              • charite.christo.strap.DialogInferCDS (implements java.awt.event.ActionListener)
              • charite.christo.strap.DialogNeighborsResult (implements java.awt.event.ActionListener, charite.christo.ChRunnable, charite.christo.protein.StrapListener)
              • charite.christo.strap.DialogNewProtein (implements java.awt.event.ActionListener)
              • charite.christo.strap.DialogPhylogeneticTree (implements java.awt.event.ActionListener, charite.christo.ChRunnable)
              • charite.christo.strap.DialogProteinList (implements java.awt.event.ActionListener)
              • charite.christo.strap.DialogPublishAlignment (implements java.awt.event.ActionListener)
              • charite.christo.strap.DialogResidueAnnotationChanges (implements charite.christo.ProcessEv, java.lang.Runnable, charite.christo.protein.StrapListener)
              • charite.christo.strap.DialogRestoreFromBackup (implements java.awt.event.ActionListener, charite.christo.protein.StrapListener)
              • charite.christo.strap.DialogSelectionOfResidues (implements java.awt.event.ActionListener, charite.christo.IsEnabled)
              • charite.christo.strap.DialogSortProteins (implements java.awt.event.ActionListener, charite.christo.ChRunnable)
              • charite.christo.strap.EditDna (implements java.awt.event.ActionListener)
              • charite.christo.strap.FilesFetchedFromServer (implements charite.christo.ChRunnable, charite.christo.ProcessEv)
            • charite.christo.strap.ActivateDeactivate (implements java.awt.event.ActionListener)
            • charite.christo.ChTableLayout (implements charite.christo.ChRunnable, charite.christo.PaintHook, charite.christo.ProcessEv, javax.swing.table.TableCellRenderer, charite.christo.TooltipProvider)
            • charite.christo.ChTabPane (implements java.util.Comparator<T>, charite.christo.PaintHook, charite.christo.PreferredSize, charite.christo.ProcessEv)
            • charite.christo.ChTextView (implements charite.christo.ChRunnable)
            • charite.christo.strap.DialogAlignResult (implements charite.christo.Disposable, charite.christo.PaintHook, charite.christo.ProcessEv, java.lang.Runnable)
            • charite.christo.strap.DialogSimilarStructureResult (implements java.awt.event.ActionListener, charite.christo.Disposable)
            • charite.christo.protein.Protein3d (implements charite.christo.ChRunnable, charite.christo.Disposable, charite.christo.PaintHook, charite.christo.ProcessEv, charite.christo.TooltipProvider)
          • charite.christo.strap.extensions.DemoAssociateObjectsToProteins (implements java.awt.event.ActionListener, charite.christo.Disposable, charite.christo.HasRenderer, charite.christo.strap.StrapExtension)
          • charite.christo.strap.DialogDotPlot_Sequence (implements java.awt.event.ActionListener, java.lang.Runnable)
          • charite.christo.DialogExecuteOnFile (implements java.awt.event.ActionListener)
          • charite.christo.strap.DialogSuperimpose3DResult (implements java.awt.event.ActionListener, charite.christo.Disposable, charite.christo.PaintHook, java.lang.Runnable, charite.christo.protein.StrapListener)
          • charite.christo.GraphSun (implements java.awt.event.ActionListener, charite.christo.Disposable, java.lang.Runnable)
          • charite.christo.strap.IntermediateSeqPair (implements java.awt.event.ActionListener, charite.christo.Disposable, charite.christo.HasControlPanel, java.awt.event.MouseWheelListener, charite.christo.PaintHook, charite.christo.PreferredSize, java.lang.Runnable)
          • charite.christo.RenameFile (implements java.awt.event.ActionListener)
          • charite.christo.ScrollLabel
        • javax.swing.JScrollBar (implements javax.accessibility.Accessible, java.awt.Adjustable)
          • charite.christo.ChScrollBar
            • charite.christo.strap.HScrollBar
        • javax.swing.JScrollPane (implements javax.accessibility.Accessible, javax.swing.ScrollPaneConstants)
          • charite.christo.ChJScrollPane (implements charite.christo.PaintHook, charite.christo.ProcessEv)
        • javax.swing.JSlider (implements javax.accessibility.Accessible, javax.swing.SwingConstants)
          • charite.christo.ChSlider (implements javax.swing.event.ChangeListener, charite.christo.HasModiCount, java.awt.event.MouseWheelListener)
        • javax.swing.JTabbedPane (implements javax.accessibility.Accessible, java.io.Serializable, javax.swing.SwingConstants)
          • charite.christo.strap.AbstractDialogJTabbedPane (implements charite.christo.Disposable)
            • charite.christo.strap.AbstractDialogPredict (implements java.awt.event.ActionListener)
              • charite.christo.strap.DialogPredictCoiledCoil
              • charite.christo.strap.DialogPredictSecondaryStructures
              • charite.christo.strap.DialogPredictTmHelices2
                • charite.christo.strap.DialogPredictTmHelicesMulti (implements charite.christo.protein.StrapListener)
            • charite.christo.strap.Dialog_bl2seq (implements java.lang.Runnable)
            • charite.christo.strap.DialogAlign (implements java.awt.event.ActionListener, charite.christo.ChRunnable, charite.christo.protein.StrapListener)
            • charite.christo.strap.DialogAlignOneToAll (implements java.awt.event.ActionListener, charite.christo.protein.StrapListener)
            • charite.christo.strap.DialogBlast (implements java.awt.event.ActionListener, charite.christo.ChRunnable)
            • charite.christo.strap.DialogCompareProteins (implements java.awt.event.ActionListener)
            • charite.christo.strap.DialogDifferentResidues (implements java.awt.event.ActionListener)
            • charite.christo.strap.DialogExportAlignment (implements java.lang.Runnable)
            • charite.christo.strap.DialogExportWord (implements java.awt.event.ActionListener)
            • charite.christo.strap.DialogFetchPdb (implements java.awt.event.ActionListener)
            • charite.christo.strap.DialogFetchSRS (implements java.awt.event.ActionListener)
            • charite.christo.strap.DialogGenbank (implements java.awt.event.ActionListener, charite.christo.protein.NeedsProteins, java.lang.Runnable)
            • charite.christo.strap.DialogImportMFA (implements java.awt.event.ActionListener)
            • charite.christo.strap.DialogNeighbors (implements java.awt.event.ActionListener)
            • charite.christo.strap.DialogNonRedundantSequenceSet (implements java.awt.event.ActionListener)
            • charite.christo.strap.DialogPlot (implements java.awt.event.ActionListener, charite.christo.HasModiCount, charite.christo.IsEnabled, charite.christo.protein.ResidueSelection, charite.christo.protein.StrapListener, charite.christo.strap.ValueOfAlignPosition, charite.christo.protein.ValueOfResidue, charite.christo.protein.VisibleIn123)
            • charite.christo.strap.DialogSelectionOfResiduesMain (implements java.awt.event.ActionListener)
            • charite.christo.strap.DialogSimilarStructure (implements java.awt.event.ActionListener, java.lang.Runnable, charite.christo.protein.StrapListener)
            • charite.christo.strap.DialogSubcellularLocalization (implements java.awt.event.ActionListener, charite.christo.ChRunnable, charite.christo.protein.StrapListener)
            • charite.christo.strap.DialogSuperimpose3D (implements java.awt.event.ActionListener, charite.christo.ChRunnable)
            • charite.christo.strap.IntermediateSeq (implements charite.christo.ChRunnable, charite.christo.Disposable, charite.christo.HasControlPanel, charite.christo.ProcessEv, charite.christo.protein.StrapListener)
            • charite.christo.strap.Texshade (implements java.awt.event.ActionListener, charite.christo.ChRunnable, charite.christo.Disposable, charite.christo.protein.NeedsProteins, charite.christo.protein.StrapListener)
        • javax.swing.JTable (implements javax.accessibility.Accessible, javax.swing.event.CellEditorListener, javax.swing.event.ListSelectionListener, javax.swing.event.RowSorterListener, javax.swing.Scrollable, javax.swing.event.TableColumnModelListener, javax.swing.event.TableModelListener)
          • charite.christo.ChJTable (implements java.util.Comparator<T>, charite.christo.ProcessEv)
        • javax.swing.text.JTextComponent (implements javax.accessibility.Accessible, javax.swing.Scrollable)
          • javax.swing.JEditorPane
            • javax.swing.JTextPane
              • charite.christo.ChJTextPane
          • javax.swing.JTextArea
            • charite.christo.ChTextArea (implements charite.christo.ChRunnable, java.lang.Runnable)
          • javax.swing.JTextField (implements javax.swing.SwingConstants)
            • charite.christo.ChTextField
        • javax.swing.JTree (implements javax.accessibility.Accessible, javax.swing.Scrollable)
          • charite.christo.ChJTree (implements charite.christo.HasWeakRef)
            • charite.christo.strap.StrapTree (implements charite.christo.ChRunnable, charite.christo.ProcessEv)
        • charite.christo.RendererNumberAsOval (implements javax.swing.table.TableCellRenderer)
      • java.awt.Window (implements javax.accessibility.Accessible)
        • java.awt.Frame (implements java.awt.MenuContainer)
          • javax.swing.JFrame (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
            • charite.christo.ChFrame (implements charite.christo.ProcessEv)
  • javax.swing.plaf.ComponentUI
    • javax.swing.plaf.ScrollBarUI
      • javax.swing.plaf.basic.BasicScrollBarUI (implements java.awt.LayoutManager, javax.swing.SwingConstants)
        • javax.swing.plaf.metal.MetalScrollBarUI
          • apple.laf.AquaScrollBarUI
            • charite.christo.ChAquaScrollBarUI
          • charite.christo.ChMetalScrollBarUI
        • com.sun.java.swing.plaf.windows.WindowsScrollBarUI
          • charite.christo.ChWindowsScrollBarUI
  • charite.christo.strap.extensions.ConsensusSequence (implements charite.christo.strap.StrapExtension)
  • charite.christo.strap.ContextObjects
  • charite.christo.strap.extensions.CountResidues (implements charite.christo.HasModiCount, charite.christo.protein.ValueOfProtein)
  • charite.christo.protein.CrudeSequenceDisSimilarity (implements charite.christo.protein.SequenceDisSimilarity)
  • charite.christo.protein.CrudeSequenceSimilarity
  • charite.christo.strap.CsaWeb
  • charite.christo.Customize (implements java.awt.event.ActionListener, charite.christo.ChRunnable, charite.christo.HasModiCount, charite.christo.HasPanel)
  • charite.christo.protein.DAS.Capability
  • charite.christo.protein.DAS.Coordinates
  • charite.christo.protein.DAS.Entry (implements java.lang.Runnable)
  • javax.swing.DefaultListSelectionModel (implements java.lang.Cloneable, javax.swing.ListSelectionModel, java.io.Serializable)
    • charite.christo.ChListSelectionModel
  • charite.christo.DesktopUtils (implements java.awt.dnd.DropTargetListener)
  • charite.christo.DialogFindInText (implements charite.christo.Disposable, charite.christo.ProcessEv)
  • charite.christo.strap.DialogManyInOneRow (implements java.awt.event.ActionListener)
  • charite.christo.strap.DialogPredictTexshade (implements java.awt.event.ActionListener)
  • charite.christo.strap.DialogRenameProteins (implements java.awt.event.ActionListener, java.lang.Runnable)
  • charite.christo.DialogStringMatch (implements java.awt.event.ActionListener, charite.christo.HasPanel)
  • charite.christo.DNA_Util
  • charite.christo.strap.DnaExonStart
  • charite.christo.strap.DrawGappedSequence
  • charite.christo.protein.DSSP_Parser (implements charite.christo.protein.ProteinParser)
  • javax.swing.text.EditorKit (implements java.lang.Cloneable, java.io.Serializable)
    • javax.swing.text.DefaultEditorKit
      • javax.swing.text.StyledEditorKit
        • javax.swing.text.html.HTMLEditorKit (implements javax.accessibility.Accessible)
          • charite.christo.HtmlDocEditorKit (implements javax.swing.text.ViewFactory)
  • charite.christo.EvAdapter (implements java.awt.event.ActionListener, javax.swing.event.ChangeListener, java.awt.event.ComponentListener, java.awt.event.FocusListener, java.awt.event.ItemListener, java.awt.event.KeyListener, javax.swing.event.ListSelectionListener, java.awt.event.MouseListener, java.awt.event.MouseMotionListener, java.awt.event.MouseWheelListener)
  • charite.christo.ExecByRegex (implements charite.christo.ChRunnable, charite.christo.ProcessEv)
  • charite.christo.strap.ExpasyGff
  • charite.christo.strap.Export2Jalview
  • charite.christo.strap.ExportAlignment (implements charite.christo.strap.AlignmentWriter, java.util.Comparator<T>)
  • charite.christo.protein.FetchSeqs
  • java.io.File (implements java.lang.Comparable<T>, java.io.Serializable)
    • charite.christo.ChFile
  • charite.christo.FileEditorEclipse (implements charite.christo.ChRunnable, charite.christo.FileEditor)
  • javax.swing.filechooser.FileFilter
    • charite.christo.ChFileFilter (implements java.io.FileFilter)
  • charite.christo.FilePopup (implements javax.swing.event.PopupMenuListener, charite.christo.ProcessEv, charite.christo.TooltipProvider)
  • charite.christo.protein.FindUniprotID
  • charite.christo.FullClassName
  • charite.christo.protein.Gaps2Columns
  • charite.christo.GraphEdge
  • charite.christo.GraphNode
  • charite.christo.HelpCommands
  • charite.christo.protein.HeteroCompound (implements charite.christo.HasPropertyMap, charite.christo.HasRendererModiCount, charite.christo.HasWeakRef)
  • charite.christo.strap.HeteroPopup (implements java.awt.event.ActionListener, charite.christo.IsEnabled)
  • charite.christo.Hex2bin
  • charite.christo.HtmlDoc (implements javax.swing.event.HyperlinkListener)
  • charite.christo.HtmlDocElement (implements charite.christo.HasRenderer)
  • charite.christo.HtmlUtil
  • charite.christo.Hyperrefs
  • java.awt.image.ImageFilter (implements java.lang.Cloneable, java.awt.image.ImageConsumer)
    • java.awt.image.RGBImageFilter
      • charite.christo.ChIcon (implements charite.christo.ChRunnable)
  • java.io.InputStream (implements java.io.Closeable)
    • charite.christo.libs.bzip2.CBZip2InputStream
    • java.io.FilterInputStream
      • charite.christo.libs.UncompressInputStream
  • charite.christo.Insecure
  • charite.christo.InteractiveDownload (implements charite.christo.ChRunnable)
  • charite.christo.J_JavaEditor (implements charite.christo.FileEditor)
  • charite.christo.JListModel (implements javax.swing.ComboBoxModel)
  • charite.christo.LAFChooser (implements java.awt.event.ActionListener, java.beans.PropertyChangeListener)
  • javax.swing.text.LayeredHighlighter (implements javax.swing.text.Highlighter)
    • javax.swing.text.DefaultHighlighter
      • charite.christo.ChJHighlighter
  • charite.christo.ListOrTreeNeedsRepaint
  • charite.christo.protein.Matrix3D (implements charite.christo.HasModiCount)
  • charite.christo.protein.MergeAlignments
  • charite.christo.Microsoft (implements java.awt.event.ActionListener, charite.christo.ChRunnable)
  • java.awt.event.MouseAdapter (implements java.awt.event.MouseListener, java.awt.event.MouseMotionListener, java.awt.event.MouseWheelListener)
    • charite.christo.CollapseComponent (implements java.awt.event.AdjustmentListener, charite.christo.ChRunnable, java.awt.event.MouseMotionListener)
  • charite.christo.protein.MultiFromPairAligner (implements charite.christo.CanBeStopped, charite.christo.HasControlPanel, charite.christo.protein.NeedsProteins, charite.christo.protein.SequenceAlignerSorting)
  • charite.christo.protein.MultipleSequenceParser
  • charite.christo.strap.NextAndPrevSelection
  • charite.christo.protein.NumberedSequence_Parser (implements charite.christo.protein.ProteinParser)
  • charite.christo.OccurInText
  • charite.andrean.Overlay
  • charite.christo.protein.PDB_Parser (implements charite.christo.protein.ProteinParser)
  • charite.christo.protein.PDB_Parser_SeqRes
  • charite.christo.strap.extensions.PhylogeneticTree_Archaeopteryx (implements charite.christo.HasControlPanel, charite.christo.HasSharedControlPanel, charite.christo.protein.PhylogeneticTree)
  • charite.christo.strap.extensions.PhylogeneticTree_TreeTop (implements charite.christo.protein.PhylogeneticTree)
  • charite.christo.protein.Picr_EBI
  • charite.christo.protein.PredictSubcellularLocation.Prediction
  • charite.christo.PrgParas
  • charite.christo.PrgParasGUI (implements java.awt.event.ActionListener)
  • charite.christo.protein.Protein (implements java.awt.event.ActionListener, charite.christo.ChRunnable, charite.christo.Colored, charite.christo.HasImage, charite.christo.HasName, charite.christo.HasPropertyMap, charite.christo.protein.HasProtein, charite.christo.HasRendererModiCount, charite.christo.HasWeakRef)
  • charite.christo.protein.Protein3d.PView (implements charite.christo.protein.ProteinViewer)
  • charite.christo.protein.Protein3dUtils (implements charite.christo.ChRunnable)
  • charite.christo.strap.ProteinComboModel (implements javax.swing.ComboBoxModel, charite.christo.HasModiCount)
  • charite.christo.protein.ProteinMC
  • charite.christo.strap.ProteinPopup (implements java.awt.event.ActionListener, charite.christo.ChRunnable, charite.christo.IsEnabled)
  • charite.christo.strap.extensions.ProteinsSorter_with3D_without3D (implements charite.christo.strap.ProteinsSorter)
  • charite.christo.protein.ProteinUtils (implements java.util.Comparator<T>)
  • charite.christo.strap.ProteinViewerPopup (implements java.awt.event.ActionListener, charite.christo.ChRunnable, charite.christo.IsEnabled)
  • charite.christo.protein.ProteinWriter1 (implements charite.christo.protein.ProteinWriter)
  • charite.christo.hotswap.ProxyClass (implements charite.christo.HasRenderer)
  • charite.christo.protein.Pymol (implements java.awt.event.ActionListener, charite.christo.ChRunnable, charite.christo.protein.ProteinViewer)
  • charite.christo.Range
  • charite.christo.Ratio
  • charite.christo.strap.ResidueAnnotation (implements charite.christo.ChRunnable, charite.christo.Colored, charite.christo.Disposable, charite.christo.HasImage, charite.christo.HasModiCount, charite.christo.HasName, charite.christo.HasPropertyMap, charite.christo.HasRendererModiCount, charite.christo.HasWeakRef, charite.christo.protein.ResidueSelection, charite.christo.protein.SelectorOfNucleotides, charite.christo.protein.VisibleIn123)
  • charite.christo.strap.ResidueAnnotation.Entry (implements charite.christo.ChRunnable, charite.christo.HasRenderer)
  • charite.christo.strap.ResidueSelectionPopup (implements java.awt.event.ActionListener, charite.christo.IsEnabled)
  • charite.christo.strap.extensions.ResidueSolventAccessibility (implements charite.christo.HasModiCount, charite.christo.IsEnabled, charite.christo.protein.ValueOfResidue)
  • charite.christo.strap.extensions.ResidueValues_from_textfile (implements java.awt.event.ActionListener, charite.christo.Disposable, charite.christo.HasControlPanel, charite.christo.HasModiCount, java.lang.Runnable, charite.christo.protein.ValueOfResidue)
  • charite.christo.strap.ResSelUtils (implements charite.christo.ChRunnable, java.util.Comparator<T>)
  • charite.christo.protein.SBD_Parser (implements charite.christo.protein.ProteinParser)
  • charite.christo.protein.Selection3D (implements java.lang.Comparable<T>)
  • charite.christo.protein.SequenceForPdbID
  • charite.christo.Sil (implements charite.christo.ChRunnable)
  • charite.christo.protein.SimilarPdb_blastEBI (implements charite.christo.protein.SimilarPdbFinder)
  • charite.christo.protein.SimilarPdbFinder.Result (implements charite.christo.HasRenderer)
  • charite.christo.test.SimulateSynDeadLock (implements java.lang.Runnable)
  • charite.christo.protein.SingleFastaParser (implements charite.christo.protein.ProteinParser)
  • charite.christo.blast.SortBlastDatabases (implements java.util.Comparator<T>)
  • charite.christo.SourcefilesInJarfile (implements charite.christo.ProcessEv)
  • charite.andrean.SpAreaIndex
  • charite.andrean.SpBigMatrix
  • charite.andrean.SpBigVector
  • charite.christo.strap.science.SpearmansRangCorrelation
  • charite.andrean.SpOverlay
  • charite.christo.strap.SPUtils (implements charite.christo.ChRunnable, java.util.Comparator<T>)
  • charite.andrean.SpVector
  • charite.christo.strap.Strap (implements java.awt.event.ActionListener, charite.christo.ChRunnable)
  • charite.christo.strap.StrapAlign (implements charite.christo.ChRunnable, java.awt.dnd.DropTargetListener, charite.christo.ProcessEv, charite.christo.protein.ProteinAlignment)
  • charite.christo.protein.StrapEvent (implements java.lang.Runnable)
  • charite.christo.strap.StrapHotswap (implements charite.christo.ChRunnable, charite.christo.HasPanel, charite.christo.PaintHook, charite.christo.ProcessEv)
  • charite.christo.strap.StrapKeyStroke
  • charite.christo.strap.StrapPlugin (implements charite.christo.HasRenderer)
  • charite.christo.strap.StrapPlugins (implements java.awt.event.ActionListener, charite.christo.ChRunnable)
  • charite.christo.strap.StrapScriptInterpreter (implements charite.christo.ChRunnable)
  • charite.christo.strap.StrapUtils
  • charite.christo.strap.StrapView (implements java.awt.event.ActionListener, charite.christo.ChRunnable, charite.christo.Disposable, charite.christo.PaintHook, charite.christo.PreferredSize, charite.christo.ProcessEv, charite.christo.protein.StrapListener, charite.christo.TooltipProvider)
  • charite.christo.Strings2Tree (implements charite.christo.ChRunnable)
  • charite.christo.protein.StupidParser (implements charite.christo.protein.ProteinParser)
  • charite.christo.strap.extensions.SubcellularLocationSherLoc (implements charite.christo.protein.PredictSubcellularLocation)
  • charite.christo.strap.extensions.Superimpose_Goede (implements charite.christo.protein.Superimpose3D)
  • charite.christo.protein.Superimpose3D.Result
  • charite.christo.protein.SwissHeaderParser
  • charite.christo.TabItemTipIcon
  • charite.christo.TextMatches
  • java.lang.Thread (implements java.lang.Runnable)
    • charite.christo.ChDelay (implements charite.christo.ChRunnable)
    • charite.christo.ChJarSignersHardLinker
    • charite.christo.protein.ReferenceSequence
  • charite.christo.strap.extensions.TransmembraneHelix_TMAP_MULTI (implements charite.christo.HasControlPanel, charite.christo.NeedsInternet, charite.christo.protein.TransmembraneHelix_Predictor)
  • charite.christo.strap.extensions.TransmembraneHelix_TOPPRED (implements charite.christo.Disposable, charite.christo.HasNativeExec, charite.christo.protein.TransmembraneHelix_Predictor)
  • charite.christo.strap.Tutorials (implements charite.christo.ChRunnable, charite.christo.ProcessEv)
  • charite.christo.UniqueList<T> (implements charite.christo.ChRunnable, charite.christo.HasModiCount, charite.christo.HasPropertyMap, charite.christo.HasRenderer, java.util.List<E>)
  • charite.christo.strap.V3dUtils (implements charite.christo.ChRunnable, charite.christo.PaintHook, charite.christo.ProcessEv, charite.christo.TooltipProvider)
  • charite.christo.Web (implements charite.christo.ChRunnable)
  • charite.christo.protein.XML_SequenceParser (implements charite.christo.protein.ProteinParser)

Interface Hierarchy

• charite.christo.strap.AlignmentWriter
• charite.christo.CanBeStopped
• charite.christo.ChRunnable
  • charite.christo.protein.ProteinAlignment
• charite.christo.Colored
  • charite.christo.protein.VisibleIn123
• charite.christo.CommandInterpreter
  • charite.christo.protein.ProteinViewer (also extends charite.christo.Disposable, charite.christo.protein.HasProtein)
• charite.christo.Disposable
  • charite.christo.protein.ProteinViewer (also extends charite.christo.CommandInterpreter, charite.christo.protein.HasProtein)
• charite.christo.FileEditor
• charite.christo.FloatValue
• charite.christo.HasControlPanel
• charite.christo.HasID
• charite.christo.HasImage
• charite.christo.HasModiCount
  • charite.christo.strap.ProteinProteinDistance
  • charite.christo.strap.ProteinProteinSimilarity
  • charite.christo.strap.ProteinProteinValue (also extends charite.christo.protein.ValueOfProtein)
    • charite.christo.strap.ProteinProteinDistance
    • charite.christo.strap.ProteinProteinSimilarity
  • charite.christo.strap.ValueOfAlignPosition
  • charite.christo.protein.ValueOfProtein (also extends charite.christo.protein.HasProtein)
    • charite.christo.strap.ProteinProteinDistance
    • charite.christo.strap.ProteinProteinSimilarity
    • charite.christo.strap.ProteinProteinValue (also extends charite.christo.HasModiCount)
      • charite.christo.strap.ProteinProteinDistance
      • charite.christo.strap.ProteinProteinSimilarity
  • charite.christo.protein.ValueOfResidue (also extends charite.christo.protein.HasProtein)
• charite.christo.HasName
• charite.christo.HasNativeExec
• charite.christo.HasPanel
• charite.christo.HasPropertyMap
• charite.christo.protein.HasProtein
  • charite.christo.strap.ProteinProteinDistance
  • charite.christo.strap.ProteinProteinSimilarity
  • charite.christo.strap.ProteinProteinValue (also extends charite.christo.HasModiCount, charite.christo.protein.ValueOfProtein)
    • charite.christo.strap.ProteinProteinDistance
    • charite.christo.strap.ProteinProteinSimilarity
  • charite.christo.protein.ProteinViewer (also extends charite.christo.CommandInterpreter, charite.christo.Disposable)
  • charite.christo.protein.ResidueSelection
  • charite.christo.protein.ValueOfProtein (also extends charite.christo.HasModiCount)
    • charite.christo.strap.ProteinProteinDistance
    • charite.christo.strap.ProteinProteinSimilarity
    • charite.christo.strap.ProteinProteinValue (also extends charite.christo.HasModiCount)
      • charite.christo.strap.ProteinProteinDistance
      • charite.christo.strap.ProteinProteinSimilarity
  • charite.christo.protein.ValueOfResidue (also extends charite.christo.HasModiCount)
• charite.christo.HasRenderer
  • charite.christo.HasRendererModiCount
• charite.christo.HasScore
• charite.christo.HasWeakRef
• charite.christo.hotswap.HotswapProxy
• charite.christo.IsEnabled
• charite.christo.NeedsInternet
• charite.christo.protein.NeedsProteins
  • charite.christo.protein.SequenceAligner3D (also extends charite.christo.protein.SequenceAligner)
  • charite.christo.protein.Superimpose3D
• charite.christo.NeedsSharedInstance
  • charite.christo.HasPrgParas
  • charite.christo.HasSharedControlPanel
• charite.christo.PaintHook
• charite.christo.protein.PhylogeneticTree
• charite.christo.protein.PredictionFromAminoacidSequence
  • charite.christo.protein.CoiledCoil_Predictor
  • charite.christo.protein.SecondaryStructure_Predictor
  • charite.christo.protein.TransmembraneHelix_Predictor
• charite.christo.protein.PredictSubcellularLocation
• charite.christo.PreferredSize
• charite.christo.ProcessEv
• charite.christo.protein.ProteinParser
• charite.christo.strap.ProteinsSorter
• charite.christo.protein.ProteinWriter
• charite.christo.protein.SelectorOfNucleotides
• charite.christo.protein.SequenceAligner
  • charite.christo.protein.SequenceAligner3D (also extends charite.christo.protein.NeedsProteins)
  • charite.christo.protein.SequenceAlignerSorting
  • charite.christo.protein.SequenceAlignerTakesProfile
• charite.christo.blast.SequenceBlaster
• charite.christo.protein.SequenceDisSimilarity
• charite.christo.protein.SimilarPdbFinder
• charite.christo.protein.StrapListener
  • charite.christo.strap.StrapExtension
• charite.christo.TooltipProvider
• charite.christo.WhenCreatedWhenModified